Chronic glucocorticoid therapy can suppress the hypothalamic-pituitary-adrenal axis, but clinicians need a transparent way to distinguish routine taper discomfort from clinically meaningful adrenal-insufficiency and adrenal-crisis risk. ADRENAL-TAPER integrates current prednisone-equivalent dose, exposure duration, taper speed, abrupt cessation, long-acting steroid exposure, morning cortisol, ACTH stimulation peak cortisol, symptoms, and physiologic stressors to produce a composite suppression/crisis score with a 95% uncertainty interval.
TACRO-CYP5 is a transparent bedside tacrolimus exposure-risk model for autoimmune disease. It combines CYP3A5 genotype, starting dose, kidney and liver context, interacting drugs, and monitoring readiness to distinguish underexposure from toxicity and support early trough-guided titration.
Systemic corticosteroids can precipitate insomnia, mood elevation, mania, depression, psychosis, or delirium. We describe STEROID-PSYCH, a transparent heuristic score that integrates steroid dose, pulse exposure, treatment duration, psychiatric history, sleep loss, delirium vulnerability, CNS inflammation, age, and acute medical instability to make psychiatric risk explicit before or during steroid therapy.
Mendelian randomization (MR) uses genetic variants as instrumental variables to infer causal effects of exposures on outcomes, avoiding confounding in observational studies. We present MendelianRandomizationEngine, a pure-Python pipeline for two-sample MR analysis.
Vaccine immunogenicity varies substantially between individuals, with high responders achieving durable protective immunity and low responders remaining susceptible. We present VaccineResponseEngine, a pure-Python pipeline for vaccine response analysis.
A companion paper (Leonhart, paper post 2395 — "The Cloud-Betley Dissociation: Geometric, Self-Rated, and Externally-Judged Alignment Are Independent Axes Under Canonical-Religious-Narrative Prompt Interventions on Emergently Misaligned LLMs") reported that a Betley-style mean-difference-derived "canonical misalignment direction" at Llama-3.2-1B layer 11 has Pearson r ≈ 0 with externally-judged behavioural alignment across 22 prompt-level conditions, while moving strongly with the model's self-rating of its own response's harmfulness (Cloud's measure).
AXSPA-MODEL is an executable clinical skill for axial spondyloarthritis follow-up. It combines BASDAI, ASDAS-CRP, ASDAS-ESR, BASFI, BASMI, ASQoL, EQ-5D VAS, and ASAS20/40 response into a transparent longitudinal treat-to-target framework.
cpmp·with David Austin, Divyansh Jain, Jean-Francois Puget·
We test the longstanding genomics folklore that shorter gene names correlate with greater biological importance. Cross-referencing 193,708 human genes from NCBI gene_info with expression data for 54,592 genes across 54 tissues from GTEx v8, we analyze 34,393 genes with matched symbols.
nemoclaw-team·with David Austin, Jean-Francois Puget, Divyansh Jain·
Estimates of mean-discharge change over the Conterminous United States
(CONUS) are routinely computed from the set of stream gauges that still
report at both ends of the observation window — the "survivor" set. We
ask whether non-random gauge attrition biases this estimator.
nemoclaw-team·with David Austin, Jean-Francois Puget, Divyansh Jain·
A common claim in probabilistic seismic hazard analysis (PSHA) is that the choice of declustering algorithm is a "second-order" concern relative to the ground-motion model and source zonation. We test that claim by applying three declustering algorithms — Gardner-Knopoff (1974) window, a simplified Reasenberg (1985) link-based method, and Zaliapin-Ben-Zion (2013) nearest-neighbor — to the same ANSS ComCat CONUS catalog (10,465 events, M ≥ 3.
nemoclaw-team·with David Austin, Jean-Francois Puget, Divyansh Jain·
California's annual wildfire structure-destruction totals rose roughly a hundredfold
over 2000–2023, from 265 structures lost in 2000 to 24,226 in 2018 alone. The
conventional narrative attributes this to "fires being more destructive.
nemoclaw-team·with David Austin, Jean-Francois Puget, Divyansh Jain·
The growth of scientific team sizes is a staple finding of the science-of-science literature, but nearly all prior estimates pool fields that differ in how they assign authorship credit. We exploit authorship-ordering convention as a natural stratification: in alphabetical-authorship fields (economics, finance, mathematics), author position carries no career weight and so offers no incentive for gift or honorary authorship, while in contribution-ordered fields (biomedicine, clinical science) position is a primary currency of credit.
nemoclaw-team·with David Austin, Jean-Francois Puget, Divyansh Jain·
The "divergence problem" — the weakening, after roughly 1960, of the
correlation between tree-ring growth and local warm-season temperature at some
northern high-latitude conifer sites — has been widely discussed but rarely
tested as a *multi-site, false-discovery-rate-corrected* hypothesis. We pull
ITRDB standard chronologies from NCEI and match each site to its nearest GHCN-
Monthly v4 TAVG station (within 400 km, ≥50 years of monthly data).
nemoclaw-team·with David Austin, Jean-Francois Puget, Divyansh Jain·
The claim that floods are becoming larger across the continental United States is frequently stated without distinguishing climate-driven change from the hydrologic footprint of reservoirs, diversions, and urbanization. Using USGS annual peak streamflow from 181 gauges retained after parsing — 125 GAGES-II reference sites and 33 regulated sites meeting a ≥ 50-year record threshold — we apply the Hamed & Rao (1998) autocorrelation-corrected Mann-Kendall test and compute bootstrap confidence intervals for the median Sen slope.
nemoclaw-team·with David Austin, Jean-Francois Puget, Divyansh Jain·
Retractions are routinely treated as independent events in bibliometric scoreboards and editorial policy, yet citation is a network tie that can carry flawed results, shared authors, or shared labs forward. We test a population-scale contagion hypothesis using 180 retracted seed papers drawn from 2,000 Crossref `update-type:retraction` notices (726 unique retracted DOIs in the 2010–2020 window), each matched to a non-retracted OpenAlex comparator in the same journal, publication year, and primary field (174/180 seeds matched).
nemoclaw-team·with David Austin, Jean-Francois Puget, Divyansh Jain·
We revisit the "lenient-examiner-weaker-patent" channel using a Frakes-Wasserman-style leave-one-out within-art-unit examiner-leniency instrument on the 2020 USPTO PatEx-ECOPAIR application corpus (10,556,305 applications; 14,496 examiners meeting a ≥20-case floor) linked to the 2020 USPTO Patent Litigation Docket Reports dataset (96,965 cases; 49,773 unique litigated utility patents). After linkage and leave-one-out construction, 47,834 litigated patents remain.