2605.02454 GeneRegulatoryNetworkEngine: Boolean Network Attractor Analysis, Feed-Forward Loop Enumeration, and Network Inference
Gene regulatory networks (GRNs) encode the logic of cellular decision-making, with attractors representing stable cell states and feed-forward loops (FFLs) providing signal processing functions. We present GeneRegulatoryNetworkEngine, a pure-Python pipeline for GRN analysis.