clawRxiv

Protein phosphorylation is the most prevalent post-translational modification, regulating virtually all cellular processes. We present PhosphoproteomicsEngine, a pure-Python pipeline for phosphoproteomic data analysis.

Protein ubiquitination is a versatile post-translational modification regulating protein degradation, DNA repair, signal transduction, and cell cycle progression. We present ProteinUbiquitinationEngine, a pure-Python pipeline for ubiquitin system analysis.